Node 76
Ancestral DNA sequence:
Probabilities of bases and MPB (most probable base) at each site.
Site	A	C	G	T	MPB	Probability
1	1	0	0	0	A	1
2	0	0	0	1	T	1
3	0	0	1	0	G	1
4	1	0	0	0	A	1
5	0	0	0	1	T	1
6	0	1	0	0	C	1
7	0	0	1	0	G	1
8	0	0	0	1	T	1
9	0.03	0	0.97	0	G	0.97
10	0	0.01	0	0.99	T	0.99
11	0	0	0	1	T	1
12	1	0	0	0	A	1
13	0	0	1	0	G	1
14	1	0	0	0	A	1
15	0	0.99	0	0.01	C	0.99
16	1	0	0	0	A	1
17	0.4	0	0.6	0	G	0.6
18	0	1	0	0	C	1
19	0	0.03	0	0.97	T	0.97
20	0	0	0	1	T	1
21	1	0	0	0	A	1
22	0	0	1	0	G	1
23	1	0	0	0	A	1
24	0.05	0	0.95	0	G	0.95
25	0	1	0	0	C	1
26	1	0	0	0	A	1
27	1	0	0	0	A	1
28	0	0	0	1	T	1
29	0	0	0	1	T	1
30	0	0.99	0	0.01	C	0.99
31	1	0	0	0	A	1
32	1	0	0	0	A	1
33	1	0	0	0	A	1
34	0.02	0.36	0.54	0.08	G	0.54
35	0.18	0.06	0.01	0.75	T	0.75
36	0	0	1	0	G	1
37	0	0	1	0	G	1
38	0	0	0	1	T	1
39	0.94	0	0.06	0	A	0.94
40	0	0	0	1	T	1
41	1	0	0	0	A	1
42	0	0.36	0	0.64	T	0.64
43	0	1	0	0	C	1
44	0	0	1	0	G	1
45	0	0.96	0	0.03	C	0.96
46	0.85	0	0.15	0	A	0.85
47	1	0	0	0	A	1
48	0	0.95	0	0.05	C	0.95
49	0	0	1	0	G	1
50	0	0	1	0	G	1
51	0	0.2	0	0.8	T	0.8
52	0	1	0	0	C	1
53	0	0	1	0	G	1
54	0	0.01	0	0.99	T	0.99
55	1	0	0	0	A	1
56	1	0	0	0	A	1
57	1	0	0	0	A	1
58	0	0	0	1	T	1
59	0	0	1	0	G	1
60	0	0	1	0	G	1
61	1	0	0	0	A	1
62	1	0	0	0	A	1
63	0	0.98	0	0.02	C	0.98
64	0	1	0	0	C	1
65	0	0	1	0	G	1
66	0	0.99	0	0.01	C	0.99
67	0	0	0	1	T	1
68	0	0	1	0	G	1
69	0	0	0	1	T	1
70	0	0	1	0	G	1
71	0	0	0	1	T	1
72	0.3	0.01	0.69	0	G	0.69
73	0	0	1	0	G	1
74	1	0	0	0	A	1
75	1	0	0	0	A	1
76	0	0	1	0	G	1
77	0	1	0	0	C	1
78	0.08	0.56	0.29	0.06	C	0.56
79	1	0	0	0	A	1
80	0	0	0	1	T	1
81	0	0	0	1	T	1
82	0.12	0	0.88	0	G	0.88
83	1	0	0	0	A	1
84	0.14	0.63	0.04	0.19	C	0.63
85	1	0	0	0	A	1
86	1	0	0	0	A	1
87	0	1	0	0	C	1
88	1	0	0	0	A	1
89	0	0	0	1	T	1
90	0	0.98	0	0.02	C	0.98
91	0.01	0	0.99	0	G	0.99
92	0.66	0.01	0.33	0	A	0.66
93	0	0.99	0	0.01	C	0.99
94	1	0	0	0	A	1
95	1	0	0	0	A	1
96	0	0.22	0	0.78	T	0.78
97	1	0	0	0	A	1
98	0	0	0	1	T	1
99	0	1	0	0	C	1
100	1	0	0	0	A	1
101	1	0	0	0	A	1
102	1	0	0	0	A	1
103	0	0	1	0	G	1
104	1	0	0	0	A	1
105	0	0.14	0.01	0.85	T	0.85
106	0	0	1	0	G	1
107	0	0	1	0	G	1
108	0	0.98	0.02	0	C	0.98
109	0	0	1	0	G	1
110	0	0	0	1	T	1
111	0.12	0.03	0.84	0.02	G	0.84
112	1	0	0	0	A	1
113	0	0	0	1	T	1
114	0	0	1	0	G	1
115	0	1	0	0	C	1
116	1	0	0	0	A	1
117	0	0.88	0	0.12	C	0.88
118	0	0	0	1	T	1
119	0	1	0	0	C	1
120	0.04	0.2	0.72	0.04	G	0.72
121	1	0	0	0	A	1
122	0	0	0	1	T	1
123	0	0.37	0	0.63	T	0.63
124	0	0	1	0	G	1
125	0	0	1	0	G	1
126	0	0.8	0	0.2	C	0.8
127	0	0	1	0	G	1
128	1	0	0	0	A	1
129	0	0	0	1	T	1
130	0	0	0	1	T	1
131	0	1	0	0	C	1
132	0.62	0.04	0.3	0.04	A	0.62
133	0	1	0	0	C	1
134	0	0	0	1	T	1
135	0	0	1	0	G	1
136	0	0	1	0	G	1
137	0	0	0	1	T	1
138	0	0.02	0.01	0.97	T	0.97
139	0	0	0	1	T	1
140	1	0	0	0	A	1
141	0	0.81	0	0.18	C	0.81
142	1	0	0	0	A	1
143	0	0	0	1	T	1
144	0	0	1	0	G	1
145	0.64	0.01	0.35	0	A	0.64
146	0	0	0	1	T	1
147	0	0.01	0.01	0.98	T	0.98
148	0	0	1	0	G	1
149	1	0	0	0	A	1
150	0.98	0	0.02	0	A	0.98
151	0	0	1	0	G	1
152	1	0	0	0	A	1
153	0.01	0.71	0	0.28	C	0.71
154	0	0	1	0	G	1
155	0	0	1	0	G	1
156	0	0.89	0	0.11	C	0.89
157	0.8	0	0.2	0	A	0.8
158	0	0.02	0	0.98	T	0.98
159	0	0.86	0	0.14	C	0.86
160	0.02	0	0.98	0	G	0.98
161	0	1	0	0	C	1
162	0.14	0.51	0.06	0.29	C	0.51
163	0.19	0.77	0.02	0.03	C	0.77
164	0.98	0	0.02	0	A	0.98
165	0.94	0.01	0.04	0	A	0.94
166	0.9	0.07	0.03	0.01	A	0.9
167	1	0	0	0	A	1
168	0.14	0.68	0.09	0.09	C	0.68
169	1	0	0	0	A	1
170	0	0.99	0	0	C	0.99
171	0	0.94	0	0.05	C	0.94
172	0	0	1	0	G	1
173	0.99	0	0.01	0	A	0.99
174	0.86	0.01	0.13	0	A	0.86
175	1	0	0	0	A	1
176	0.1	0.74	0	0.15	C	0.74
177	0.01	0.95	0.03	0.01	C	0.95
178	0	0	0	1	T	1
179	0	0	0	1	T	1
180	0	0.27	0	0.73	T	0.73
181	0.57	0	0.43	0	A	0.57
182	0.02	0.04	0	0.95	T	0.95
183	0.14	0.79	0.01	0.06	C	0.79
184	0	0	1	0	G	1
185	0	0	1	0	G	1
186	0.01	0.55	0	0.44	C	0.55
187	1	0	0	0	A	1
188	1	0	0	0	A	1
189	0	0.98	0	0.02	C	0.98
190	0	1	0	0	C	1
191	0	0	1	0	G	1
192	0	0.02	0	0.98	T	0.98
193	0	1	0	0	C	1
194	0	0	1	0	G	1
195	0	0.01	0	0.99	T	0.99
196	0	0	0	1	T	1
197	1	0	0	0	A	1
198	0	0.99	0	0.01	C	0.99
199	0	0	0	1	T	1
200	0	0	0	1	T	1
201	0	0.99	0	0.01	C	0.99
202	0	0	1	0	G	1
203	1	0	0	0	A	1
204	0	0.03	0	0.97	T	0.97
205	0	0	1	0	G	1
206	0	0	0	1	T	1
207	0	0	1	0	G	1
208	0	1	0	0	C	1
209	1	0	0	0	A	1
210	0	0.03	0	0.97	T	0.97
211	0	0	0	1	T	1
212	1	0	0	0	A	1
213	0	1	0	0	C	1
214	0	0	0	1	T	1
215	1	0	0	0	A	1
216	0	1	0	0	C	1
217	0	1	0	0	C	1
218	0	0	0	1	T	1
219	0.01	0.95	0.01	0.03	C	0.95
220	0	0	1	0	G	1
221	1	0	0	0	A	1
222	1	0	0	0	A	1
223	0	0	1	0	G	1
224	0	0	1	0	G	1
225	0	0.95	0	0.05	C	0.95
226	0	0.98	0.01	0.01	C	0.98
227	0	0	1	0	G	1
228	0	0.09	0	0.91	T	0.91
229	0	0	1	0	G	1
230	1	0	0	0	A	1
231	1	0	0	0	A	1
232	1	0	0	0	A	1
233	0	1	0	0	C	1
234	0	0.92	0.01	0.08	C	0.92
235	0	0	1	0	G	1
236	0	0	0	1	T	1
237	0.05	0.03	0.08	0.84	T	0.84
238	0	0	1	0	G	1
239	1	0	0	0	A	1
240	0.01	0	0.99	0	G	0.99
241	0	0	0	1	T	1
242	0	0	0	1	T	1
243	0	0.86	0	0.14	C	0.86
244	0	0	1	0	G	1
245	0	1	0	0	C	1
246	0.01	0.66	0.09	0.24	C	0.66
247	0.04	0	0.96	0	G	0.96
248	0.99	0	0.01	0	A	0.99
249	0	0.8	0	0.19	C	0.8
250	1	0	0	0	A	1
251	1	0	0	0	A	1
252	0.94	0	0.06	0	A	0.94
253	0.04	0.09	0.03	0.84	T	0.84
254	0	0.99	0	0.01	C	0.99
255	0.04	0.82	0.01	0.13	C	0.82
256	0.01	0	0.99	0	G	0.99
257	0.99	0	0.01	0	A	0.99
258	0.4	0.12	0.44	0.04	G	0.44
259	0	0.99	0	0.01	C	0.99
260	0	0	0	1	T	1
261	0.32	0.08	0.43	0.17	G	0.43
262	0.24	0	0.75	0	G	0.75
263	0.88	0.07	0.04	0.01	A	0.88
264	0.34	0.51	0.12	0.03	C	0.51
265	0.59	0.26	0.13	0.02	A	0.59
266	0	0.06	0	0.94	T	0.94
267	0.13	0.4	0.06	0.4	T	0.4
268	0	0	1	0	G	1
269	0.04	0	0	0.96	T	0.96
270	0.09	0	0.9	0	G	0.9
271	0.04	0.87	0.09	0.01	C	0.87
272	1	0	0	0	A	1
273	0.58	0.01	0.41	0	A	0.58
274	0	0	1	0	G	1
275	0	1	0	0	C	1
276	0	0.22	0	0.77	T	0.77
277	0	0	0	1	T	1
278	1	0	0	0	A	1
279	0	0.3	0	0.7	T	0.7
280	0	1	0	0	C	1
281	0	0	1	0	G	1
282	0.13	0.77	0.01	0.1	C	0.77
283	0	0	1	0	G	1
284	1	0	0	0	A	1
285	0	0.01	0	0.99	T	0.99
286	0	0	1	0	G	1
287	1	0	0	0	A	1
288	1	0	0	0	A	1
289	1	0	0	0	A	1
290	0	1	0	0	C	1
291	0	0.94	0	0.06	C	0.94
292	0	0	1	0	G	1
293	1	0	0	0	A	1
294	0	1	0	0	C	1
295	0	1	0	0	C	1
296	0	0	1	0	G	1
297	0	0.96	0	0.04	C	0.96
298	0	0	1	0	G	1
299	1	0	0	0	A	1
300	1	0	0	0	A	1
301	0	0.02	0	0.98	T	0.98
302	0.99	0	0.01	0	A	0.99
303	0.01	0.26	0.01	0.72	T	0.72
304	0	1	0	0	C	1
305	0	0	0	1	T	1
306	0.28	0	0.71	0.01	G	0.71
307	0	0.76	0	0.24	C	0.76
308	0.96	0.03	0	0	A	0.96
309	0.91	0.03	0.04	0.02	A	0.91
310	0	0	1	0	G	1
311	0	0	1	0	G	1
312	0	0.32	0	0.68	T	0.68
313	0.05	0.87	0.05	0.03	C	0.87
314	1	0	0	0	A	1
315	0.68	0.18	0.12	0.03	A	0.68
316	0	0	0	0	-	0
317	0	0	0	0	-	0
318	0	0	0	0	-	0
319	0	0	1	0	G	1
320	0	0	1	0	G	1
321	0.01	0.09	0.01	0.89	T	0.89
322	0	0	1	0	G	1
323	1	0	0	0	A	1
324	1	0	0	0	A	1
325	1	0	0	0	A	1
326	0	1	0	0	C	1
327	0.15	0.34	0.06	0.45	T	0.45
328	0	1	0	0	C	1
329	0	0	1	0	G	1
330	0	0.34	0	0.66	T	0.66
331	0	0.02	0.98	0	G	0.98
332	1	0	0	0	A	1
333	0.57	0	0.43	0	A	0.57
334	0	0.96	0	0.04	C	0.96
335	0	0	0	1	T	1
336	0.5	0.02	0.37	0.12	A	0.5
337	0	0.03	0	0.97	T	0.97
338	0.31	0	0.69	0	G	0.69
339	0.01	0.6	0	0.39	C	0.6
340	0	0	1	0	G	1
341	1	0	0	0	A	1
342	1	0	0	0	A	1
343	0	0	1	0	G	1
344	0	0	1	0	G	1
345	0	0.96	0	0.04	C	0.96
346	0	1	0	0	C	1
347	1	0	0	0	A	1
348	0.99	0	0.01	0	A	0.99
349	0	0	1	0	G	1
350	0	0	0	1	T	1
351	0.01	0	0.99	0	G	0.99
352	0	0	1	0	G	1
353	0	1	0	0	C	1
354	0.11	0.08	0.58	0.23	G	0.58
355	1	0	0	0	A	1
356	0	0	0	1	T	1
357	0	0	0	1	T	1
358	0	0	0	1	T	1
359	0	0	0	1	T	1
360	0	0	0	1	T	1
361	0	0	1	0	G	1
362	1	0	0	0	A	1
363	0.85	0.08	0.04	0.04	A	0.85
364	1	0	0	0	A	1
365	1	0	0	0	A	1
366	0	1	0	0	C	1
367	0.18	0.02	0.79	0.01	G	0.79
368	1	0	0	0	A	1
369	0	0.95	0	0.05	C	0.95
370	1	0	0	0	A	1
371	1	0	0	0	A	1
372	1	0	0	0	A	1
373	0	0	1	0	G	1
374	0	1	0	0	C	1
375	0.03	0.12	0.8	0.05	G	0.8
376	0	0	0	1	T	1
377	1	0	0	0	A	1
378	0	1	0	0	C	1
379	0	1	0	0	C	1
380	0	0	1	0	G	1
381	0	0.91	0	0.09	C	0.91
382	0	0	0	1	T	1
383	0	0	0	1	T	1
384	0	0.99	0	0.01	C	0.99
385	0	0.98	0	0.02	C	0.98
386	0.98	0	0.02	0	A	0.98
387	0	0.99	0	0.01	C	0.99
388	0	0	1	0	G	1
389	0	0	1	0	G	1
390	0	0.31	0	0.68	T	0.68
391	0	0	1	0	G	1
392	1	0	0	0	A	1
393	0	0.94	0	0.06	C	0.94
394	0.99	0	0.01	0	A	0.99
395	1	0	0	0	A	1
396	0	0.99	0	0	C	0.99
397	0	1	0	0	C	1
398	0	0	1	0	G	1
399	0.4	0.06	0.53	0.02	G	0.53
400	0	0	1	0	G	1
401	0	0	0	1	T	1
402	0.88	0.02	0.08	0.02	A	0.88
403	0	0	0	0	-	0
404	0	0	0	0	-	0
405	0	0	0	0	-	0
406	0	0	0	0	-	0
407	0	0	0	0	-	0
408	0	0	0	0	-	0
409	0.98	0.02	0	0	A	0.98
410	0	0	1	0	G	1
411	0.96	0.02	0.02	0.01	A	0.96
412	1	0	0	0	A	1
413	1	0	0	0	A	1
414	0.96	0	0.04	0	A	0.96
415	0	0	1	0	G	1
416	0	0	0	1	T	1
417	0	0	0.99	0	G	0.99
418	0	0	1	0	G	1
419	0	0	0	1	T	1
420	0	0	1	0	G	1
421	0	1	0	0	C	1
422	0	0	0	1	T	1
423	0.03	0.01	0.96	0	G	0.96
424	1	0	0	0	A	1
425	1	0	0	0	A	1
426	1	0	0	0	A	1
427	0	0	1	0	G	1
428	0	0	0	1	T	1
429	0.02	0.02	0.95	0	G	0.95
430	1	0	0	0	A	1
431	0	1	0	0	C	1
432	0.02	0.89	0.06	0.04	C	0.89
433	1	0	0	0	A	1
434	0	0	0	1	T	1
435	0	0.97	0	0.03	C	0.97
436	0	0	1	0	G	1
437	1	0	0	0	A	1
438	0.99	0	0.01	0	A	0.99
439	0	0	1	0	G	1
440	1	0	0	0	A	1
441	0	0	0	1	T	1
442	0	0	1	0	G	1
443	0	0	1	0	G	1
444	0	0.97	0	0.03	C	0.97
445	0	0	0	1	T	1
446	1	0	0	0	A	1
447	0	0.97	0	0.03	C	0.97
448	0	0	0	1	T	1
449	0	0	0	1	T	1
450	0	1	0	0	C	1
451	0	0.97	0	0.03	C	0.97
452	0	0	0	1	T	1
453	0.53	0.11	0.27	0.08	A	0.53
454	1	0	0	0	A	1
455	1	0	0	0	A	1
456	0	0.06	0	0.94	T	0.94
457	1	0	0	0	A	1
458	1	0	0	0	A	1
459	0.85	0	0.15	0	A	0.85
460	0	0	0	1	T	1
461	1	0	0	0	A	1
462	1	0	0	0	A	1


The most probable ancestral DNA sequence is:
ATGATCGTGTTAGACAGCTTAGAGCAATTCAAAGTGGTATATCGCAACGGTCGTAAATGGAACCGCTGTGTGGAAGCCATTGACAACATCGACAATATCAAAGATGGCGTGATGCACTCGATTGGCGATTCACTGGTTTACATGATTGAAGACGGCATCGCCCAAAACACCGAAACCTTTATCGGCAACCGTCGTTACTTCGATGTGCATTACTACCTCGAAGGCCGTGAAACCGTTGAGTTCGCCGACAAATCCGAGCTGGACATTGTGCAAGCTTATCGCGATGAAACCGACCGCGAATATCTGCAAGGTCAA---GGTGAAACTCGTGAACTATGCGAAGGCCAAGTGGCGATTTTTGAAAACGACAAAGCGTACCGCTTCCACGGTGACAACCGGGTA------AGAAAAGTGGTGCTGAAAGTGACCATCGAAGATGGCTACTTCCTAAATAAATAA

The most probable DNA sequence without gaps is:
ATGATCGTGTTAGACAGCTTAGAGCAATTCAAAGTGGTATATCGCAACGGTCGTAAATGGAACCGCTGTGTGGAAGCCATTGACAACATCGACAATATCAAAGATGGCGTGATGCACTCGATTGGCGATTCACTGGTTTACATGATTGAAGACGGCATCGCCCAAAACACCGAAACCTTTATCGGCAACCGTCGTTACTTCGATGTGCATTACTACCTCGAAGGCCGTGAAACCGTTGAGTTCGCCGACAAATCCGAGCTGGACATTGTGCAAGCTTATCGCGATGAAACCGACCGCGAATATCTGCAAGGTCAAGGTGAAACTCGTGAACTATGCGAAGGCCAAGTGGCGATTTTTGAAAACGACAAAGCGTACCGCTTCCACGGTGACAACCGGGTAAGAAAAGTGGTGCTGAAAGTGACCATCGAAGATGGCTACTTCCTAAATAAATAA

The accuracy score for that sequence is 0.946070640176601

The accuracy score is defined as the average probability of
the most probable bases.  It is NOT the probability that the
most probable sequence is correct.  That probability is 1.10888918382034e-13.
The natural log of that probability is -29.8302474299652.

Ancestral Protein Sequence:
Column headings:
MPAA = most probable amino acid, pMPAA = probability of MPAA
MPAA2 = second most probable amino acid, pMPAA2 = probability of MPAA2
Ratio = pMPAA/pMPAA2,  Unreliable means Ratio <1.5

MPAA	pMPAA	MPAA2	pMPAA2	Ratio
M	1	A	0	9999	
I	1	A	0	9999	
V	1	A	0	9999	
L	1	A	0	9999	
D	1	A	0	9999	
S	0.6	N	0.4	1.5	Unreliable
L	1	A	0	9999	
E	1	A	0	9999	
Q	1	A	0	9999	
F	1	A	0	9999	
K	1	A	0	9999	
V	0.405	L	0.33	1.22727272727273	Unreliable
V	1	A	0	9999	
Y	1	A	0	9999	
R	0.99	A	0	9999	
N	0.85	D	0.15	5.66666666666667	
G	1	A	0	9999	
R	1	A	0	9999	
K	1	A	0	9999	
W	1	A	0	9999	
N	1	A	0	9999	
R	1	A	0	9999	
C	1	A	0	9999	
V	1	A	0	9999	
E	1	A	0	9999	
A	0.99	R	0	9999	
I	1	A	0	9999	
D	0.7216	E	0.1584	4.55555555555556	
N	1	A	0	9999	
I	1	A	0	9999	
D	0.6534	G	0.3267	2	
N	1	A	0	9999	
I	1	A	0	9999	
K	1	A	0	9999	
D	0.99	E	0.01	99	
G	1	A	0	9999	
V	1.01	A	0	9999	
M	1	A	0	9999	
H	1	A	0	9999	
S	1	A	0	9999	
I	1	A	0	9999	
G	1	A	0	9999	
D	1	A	0	9999	
S	1	A	0	9999	
L	1	A	0	9999	
V	1	A	0	9999	
Y	0.99	A	0	9999	
M	1	A	0	9999	
I	0.6336	V	0.35	1.81028571428571	
E	1	A	0	9999	
D	0.99	E	0.01	99	
G	1	A	0	9999	
I	0.784	V	0.196	4	
A	0.98	T	0.02	49	
Q	0.739508	K	0.182476	4.05263157894737	
N	0.693	K	0.207	3.34782608695652	
T	0.9801	A	0	9999	
E	0.9801	G	0.01	98.01	
T	0.74	I	0.1455	5.08591065292096	
F	1	A	0	9999	
I	0.536085	V	0.4085	1.31232558139535	Unreliable
G	1	A	0	9999	
N	1	A	0	9999	
R	1	A	0	9999	
R	1	A	0	9999	
Y	1	A	0	9999	
F	1	A	0	9999	
D	1	A	0	9999	
V	1	A	0	9999	
H	1	A	0	9999	
Y	1	A	0	9999	
Y	1	A	0	9999	
L	1	A	0	9999	
E	1	A	0	9999	
G	1	A	0	9999	
R	0.98	C	0.01	98	
E	1	A	0	9999	
T	1.01	A	0	9999	
V	1	A	0	9999	
E	1	A	0	9999	
F	1	A	0	9999	
A	1	R	0	9999	
D	0.940896	N	0.039204	24	
K	1	A	0	9999	
S	0.8316	P	0.0891	9.33333333333333	
E	0.823284	D	0.156816	5.25	
L	0.9975	F	0.0025	399	
D	0.3564	E	0.3036	1.17391304347826	Unreliable
I	0.515778	L	0.245528	2.10068912710567	
V	0.9504	E	0.0396	24	
Q	0.8613	E	0.0891	9.66666666666667	
A	0.99	R	0	9999	
Y	1	A	0	9999	
R	1.01	A	0	9999	
D	1	A	0	9999	
E	1	A	0	9999	
T	1	A	0	9999	
D	1	A	0	9999	
R	1	A	0	9999	
E	1	A	0	9999	
Y	0.950796	X	0.019502	48.7537688442211	
L	1	A	0	9999	
Q	0.69312	X	0.21888	3.16666666666667	
G	1	A	0	9999	
Q	0.696	H	0.1827	3.80952380952381	
	0	-	0	0
G	1	A	0	9999	
E	1	A	0	9999	
T	1	A	0	9999	
R	1	A	0	9999	
E	0.98	Q	0.02	49	
L	1.0044	F	0.0056	179.357142857143	
C	0.662607	Y	0.297693	2.2258064516129	
E	1	A	0	9999	
G	1	A	0	9999	
Q	1	A	0	9999	
V	1	A	0	9999	
A	1	R	0	9999	
I	1	A	0	9999	
F	1	A	0	9999	
E	0.89	D	0.12	7.41666666666667	
N	1	A	0	9999	
D	0.79	N	0.18	4.38888888888889	
K	1	A	0	9999	
A	1	R	0	9999	
Y	1	A	0	9999	
R	1	A	0	9999	
F	1	A	0	9999	
H	0.9604	R	0.0196	49	
G	0.99	A	0	9999	
D	1	A	0	9999	
N	0.9801	D	0.0099	99	
R	1.01	A	0	9999	
V	1	A	0	9999	
	0	-	0	0
	0	-	0	0
R	0.9806	S	0.0294	33.3537414965986	
K	1	A	0	9999	
V	0.99	A	0	9999	
V	1	A	0	9999	
L	1	A	0	9999	
K	1	A	0	9999	
V	0.99	A	0	9999	
T	1.01	A	0	9999	
I	1	A	0	9999	
E	1	A	0	9999	
D	1	A	0	9999	
G	1	A	0	9999	
Y	1	A	0	9999	
F	1	A	0	9999	
L	0.9843	F	0.0057	172.684210526316	
N	1	A	0	9999	
K	1	A	0	9999	
X	1	A	0	9999	


The most probable ancestral protein sequence is:
MIVLDSLEQFKVVYRNGRKWNRCVEAIDNIDNIKDGVMHSIGDSLVYMIEDGIAQNTETFIGNRRYFDVHYYLEGRETVEFADKSELDIVQAYRDETDREYLQGQ-GETRELCEGQVAIFENDKAYRFHGDNRV--RKVVLKVTIEDGYFLNKX

The most probable ancestral protein sequence without gaps is:
MIVLDSLEQFKVVYRNGRKWNRCVEAIDNIDNIKDGVMHSIGDSLVYMIEDGIAQNTETFIGNRRYFDVHYYLEGRETVEFADKSELDIVQAYRDETDREYLQGQGETRELCEGQVAIFENDKAYRFHGDNRVRKVVLKVTIEDGYFLNKX

The accuracy score for that sequence is 0.954211086092715

The accuracy score is defined as the average probability of
the most probable amino acids.  It is NOT the probability that the
most probable sequence is correct.  That probability is 0.000160961872771959
The natural log of that probability is -8.73434303610593.

